CorpusCallosum.cc_visualization¶

CorpusCallosum.cc_visualization.load_contours_from_template_dir(template_dir, resolution, smoothing_window)[source]¶: Load all contours and thickness data from a template directory.

CorpusCallosum.cc_visualization.main(template_dir, output_dir, resolution=1.0, smoothing_window=5, colormap='red_to_yellow', color_range=None, legend=None, twoD=False)[source]¶: Visualize corpus callosum templates in 2D or 3D.

CorpusCallosum.cc_visualization.make_parser()[source]¶: Create a command line parser for the visualization pipeline.

CorpusCallosum.cc_visualization.options_parse()[source]¶: Parse command line arguments for the pipeline.